Lisa Krieger – Boston Herald https://www.bostonherald.com Boston news, sports, politics, opinion, entertainment, weather and obituaries Tue, 31 Oct 2023 18:45:51 +0000 en-US hourly 30 https://wordpress.org/?v=6.3.2 https://www.bostonherald.com/wp-content/uploads/2019/03/HeraldIcon.jpg?w=32 Lisa Krieger – Boston Herald https://www.bostonherald.com 32 32 153476095 CRISPR gene editing could kill HIV. But is it a cure? https://www.bostonherald.com/2023/10/31/crispr-could-kill-hiv-but-is-it-a-cure/ Tue, 31 Oct 2023 18:43:45 +0000 https://www.bostonherald.com/?p=3579526&preview=true&preview_id=3579526 In a provocative first step toward an elusive end to a devastating disease that has claimed 40 million lives, three patients have received CRISPR gene-editing therapies in an effort to eradicate HIV from their bodies.

The results — whether the men are cured or not after the one-time intravenous infusions this year — have not yet been disclosed by the San Francisco biotech company that created the technology based on Nobel Prize-winning research by UC Berkeley’s Jennifer Doudna.

But the potential treatment, called EBT-101, is safe and caused no major side effects, Excision BioTherapeutics reported at a meeting in Brussels.

Six more men will be treated, perhaps some at UC San Francisco, with higher doses. Participating in the research program is potentially risky: Participants stop their protective anti-HIV drugs for 12 weeks after gene-editing treatment to see if the virus is gone. Data will be presented at a medical conference next year, according to the company.

“We are opening the door for how this new drug will work and what potential it has for people living with HIV,” said Dr. William Kennedy, Excision senior vice president of clinical development. “Ultimately, we see this as a fundamentally new approach.”

The novel strategy could potentially treat other chronic infections where the virus hides latent, such as hepatitis and herpes, he said. It leaves human DNA intact.

“We were super excited about this, and to get the chance to be among the first to do human studies of gene editing for a cure,” said Dr. Priscilla Hsue, professor of medicine and principal investigator for the study’s clinical trial site at UCSF. “If we can permanently remove viral DNA, the thought is, people would get this infusion and then be done.”

EBT-101 is designed to find the specific viral sequences so that it doesn’t cut human DNA. The CRISPR-based therapy uses an empty virus to deliver the “guide RNA” that marks where to cut. An enzyme called Cas9 acts like scissors. The therapeutic solution is given intravenously.

It received the FDA’s “fast track” designation last July after experiments showed success in animals. A single injection safely and efficiently removed SIV, a virus related to HIV, from the genomes of rhesus monkeys. In earlier work, it removed HIV from nine of 23 mice.

But there is a big leap from promising results in mice to success in humans. In addition to UCSF, patients will be recruited at Quest Clinical Research in San Francisco, Washington University in St. Louis and Cooper University in Camden, New Jersey.

In the four decades since the AIDS virus was isolated, treatment has transformed its care. If taken every day, powerful antiretroviral drugs can suppress the virus, controlling illness. Medicine can also prevent infection.

But a cure is needed to end the pandemic. Worldwide, nearly 39 million people are living with HIV. About 77% of them are receiving treatment.

There have only been three known cases of an HIV cure so far. Two were men who received bone marrow transplants from donors who carried a mutation that blocks HIV infection. The third was a woman who received a transplant of umbilical cord blood. But all three treatments were targeting cancer, so this is not a practical option for the average HIV patient.

“The future of so many lives depends on another breakthrough,” said Mark S. King, an Atlanta-based HIV/AIDS activist and author of the book My Fabulous Disease who has lived with the virus for nearly 40 years.

“A lot of people think that this was all rectified when we got successful treatments,” he said. “But the difference between a treatment and a cure, or a vaccine, is profound.”

Excision BioTherapeutics was founded on work in the lab of Kamel Khalili, a professor at Temple University in Philadelphia and director of its Center for NeuroVirology and Gene Editing.

Its research is supported, in part, by the taxpayer-supported California Institute of Regenerative Medicine. The early results of its study were presented at the European Society of Gene and Cell Therapy on Wednesday.

CRISPR gene editing, an ingenious system discovered by Jennifer Doudna, a biologist with UC-Berkeley’s Innovative Genomics Institute, can cure genetic disease by using little molecular scissors to cut out a piece of a person’s DNA. It is now being used to treat several diseases, such as sickle cell anemia, nerve disease and congenital blindness.

Scientists wondered: Could CRISPR cure HIV by cutting the virus’s DNA? Excision’s approach cuts the virus in two places, removing genes that are essential to replication.

“This is an exceptionally ambitious and important trial,” said Fyodor Urnov, professor of molecular and cell biology at UC-Berkeley and a gene editor at IGI, in an email. “It would be good to know sooner than later” if it works, he said, “including, potentially, no effect.”

Initial research in Khalili’s lab showed that CRISPR could find and destroy the HIV genes in cells.

The results were welcomed with caution by long-term survivors such as King. “Am I intrigued? Yes. Wary? Absolutely. We have been here before, many times. We’ve heard of a lot of promising developments over the years, only to have the rug pulled out from us — because of the vexing nature of how HIV operates in the body.”

The reason that HIV has been so tough to eradicate is that it hides in our cells, said Dr. Jyoti Gupta of the PACE Clinic at Santa Clara Valley Medical Center, which specializes in HIV care.

“The virus is very smart,” she said. “It integrates into the host genome of our immune cells, which are supposed to protect us from infection. It just lies there, hiding.”

“As soon as someone stops the therapy, the latent virus starts replicating again, within days,” said Gupta. “Then there’s virus everywhere.”

Patients in Excision’s trials will be monitored for 15 years, said Kennedy.

Even if it just stops replication for awhile, that’s a benefit, said Gupta. “Less is more. So if a patient can come in for an infusion once a year, for instance, and the virus won’t resurface for a year, that’s reasonable.”

The hope is that Excision’s therapy could become a lifelong cure, freeing patients from daily pill-popping

“Scientists tell me that this is going to be part of a cure some day,” said Berkeley-based AIDS activist Matt Sharp, 68, who has lived with the virus for 38 years. “And I shrug my shoulders and say, ‘Here we go again.’ “

“Now we just have to get the research done,” he said.  “We’ve got to have hope, because the epidemic isn’t over.”

]]>
3579526 2023-10-31T14:43:45+00:00 2023-10-31T14:45:51+00:00
A pioneering gene therapy aims to free patients of blood disease. Is a cure at hand? https://www.bostonherald.com/2023/10/26/childrens-hospital-oaklands-pioneering-gene-therapy-aims-to-free-patients-of-blood-disease-is-a-cure-at-hand/ Thu, 26 Oct 2023 18:36:59 +0000 https://www.bostonherald.com/?p=3529980&preview=true&preview_id=3529980 Faith in God called Clint and Alissa Finlayson to adopt two sick girls from an orphanage in China. Faith in medicine called them to Oakland.

Born with a deadly blood disease, the Finlayson’s daughters — Ada, 9, and Lily, 12 — are the first patients on the West Coast to receive a new gene therapy offered by UCSF Benioff Children’s Hospital Oakland.

Already, Ada is already feeling better 10 weeks after receiving her stem cell transplant. Lily started treatment last week. Both have 90% chance of a permanent cure.

“It’s science, and it’s a miracle,” said their mother Alissa, sitting in the small yard of their guest home in downtown Oakland, far from their small mountain town of Kalispell, Montana.

Alissa Finlayson, left, along with her daughters Lily, 12,, Ruby, 10, and Ada, 9, create art with Foil Fun in the patio at Ronald McDonald House create art with Foil Fun in the patio at Ronald McDonald House where Ada and Lily are being monitored after gene therapy for beta thalassemia by UCSF Benioff Children's Hospital in Oakland, Calif., on Wednesday, Oct. 18, 2023. Since treatment in August, Ada no longer needs weekly blood transfusions for her rare genetic blood disorder, which causes severe anemia and potentially fatal organ damage. (Ray Chavez/Bay Area News Group)
Alissa Finlayson, left, along with her daughters Lily, 12,, Ruby, 10, and Ada, 9, create art with Foil Fun in the patio at Ronald McDonald House create art with Foil Fun in the patio at Ronald McDonald House where Ada and Lily are being monitored after gene therapy for beta thalassemia by UCSF Benioff Children’s Hospital in Oakland, Calif., on Wednesday, Oct. 18, 2023.. (Ray Chavez/Bay Area News Group)

The children were born with beta thalassemia, a common hereditary red blood cell diseases in China. Unable to create normal blood cells, they’ve needed six-hour-long blood transfusions every 21 days, an intense treatment that carries risk and requires constant monitoring.

Because Chinese orphanages can’t provide treatment, both girls were destined to live short lives.

Then the family found that UCSF’s Oakland hospital is one of three sites in the U.S. to offer the initial test of the therapy, Zynteglo. Now that Zynteglo is FDA approved, the hospital is among 15 in the nation authorized to provide care. Stanford’s Lucile Packard Children’s Hospital, Loma Linda University Children Hospital and Seattle Children’s Hospital will also offer the treatment.

The therapy is a one-time treatment that works by using an engineered virus to deliver a healthy gene into patient cells. It’s not the same as CRISPR, which uses gene editing to fix existing genes. That process is still under review and has not received FDA approval.

Ada Finlayson, 9, looks on from the patio at Ronald McDonald House where she is being monitored after gene therapy for beta thalassemia by UCSF Benioff Children's Hospital in Oakland, Calif., on Wednesday, Oct. 18, 2023. Since treatment in August, Ada no longer needs weekly blood transfusions for her rare genetic blood disorder, which causes severe anemia and potentially fatal organ damage. (Ray Chavez/Bay Area News Group)
Ada Finlayson, 9, looks on from the patio at Ronald McDonald House where she is being monitored after gene therapy for beta thalassemia by UCSF Benioff Children’s Hospital in Oakland, Calif., on Wednesday, Oct. 18, 2023. (Ray Chavez/Bay Area News Group)

“The point of the treatment is to stop those transfusions,” said Dr. Mark Walters, a hematologist and director of the hospital’s Pediatric Blood and Marrow Transplant Program. Walters will follow the girls and other patients for 15 years to see if there are long-term complications, or if they remain free of disease and can be considered truly cured. Other patients are in the hospital’s pipeline.

Beta thalassemia is caused by a single mutation on the gene for hemoglobin, the protein in red blood cells that carries oxygen to tissues. Children develop life-threatening anemia. They can’t gain weight or grow properly.  They suffer organ damage.

By fixing the underlying genetic problem, the new treatment buoys hopes for an estimated 1,300 to 1,500 patients — and opens up the possibility of treating other simple inherited disorders.

Scientists say this approach will be a crucial part of 21st century medicine. An estimated 400 million people worldwide are affected by one of the 7,000 diseases caused by mutations in a single gene. ‌

Ada Finlayson, 9, left, and her sister Lily, 12, interact each other in the patio at Ronald McDonald House where Ada is being monitored after gene therapy for beta thalassemia by UCSF Benioff Children's Hospital in Oakland, Calif., on Wednesday, Oct. 18, 2023. Since treatment in August, Ada no longer needs weekly blood transfusions for her rare genetic blood disorder, which causes severe anemia and potentially fatal organ damage. (Ray Chavez/Bay Area News Group)
Ada Finlayson, 9, left, and her sister Lily, 12, interact each other in the patio at Ronald McDonald House where Ada is being monitored after gene therapy for beta thalassemia by UCSF Benioff Children’s Hospital in Oakland, Calif., on Wednesday, Oct. 18, 2023. (Ray Chavez/Bay Area News Group)

“It’s incredibly exciting time, as we harness what we’ve learn about genes and then how to fix them,” said Walters.

“This is just one disease we’re treating with the gene therapy,” he said. “There are lots and lots of others to work on. All the lessons we’ve learned about genetics are coming to fruition.”

These customized treatments remain challenging to build and are profoundly expensive. Zynteglo, made by Massachusetts-based biotech company bluebird bio, costs $2.8 million for a single-use vial, making it one of the most expensive drugs in the world.

But money is saved by a lifetime without ongoing care, which can cost many millions of dollars.

Devout Christians, the Finlaysons married in their early 20s and soon bore two biological children in the picturesque 1800s-era town near Glacier National Park, with mountains, alpine trails and lakes filled with trout. Clint, 41, is an engineer; Alissa, 38, is a music teacher who homeschools their children.

Seeking to grow their family, they shared a dream of adoption. They agreed to welcome a child with any medical condition.

“It’s just something that you figure out,” said Alissa. “We have very strong faith that God is going to put the child in our path that he wants us to adopt.”

Ada Finlayson, 9, looks on from the patio at Ronald McDonald House where she is being monitored after gene therapy for beta thalassemia by UCSF Benioff Children's Hospital in Oakland, Calif., on Wednesday, Oct. 18, 2023. Since treatment in August, Ada no longer needs weekly blood transfusions for her rare genetic blood disorder, which causes severe anemia and potentially fatal organ damage. (Ray Chavez/Bay Area News Group)
Ada Finlayson, 9, looks on from the patio at Ronald McDonald House where she is being monitored after gene therapy for beta thalassemia by UCSF Benioff Children’s Hospital in Oakland, Calif., on Wednesday, Oct. 18, 2023. (Ray Chavez/Bay Area News Group)

Charmed by Lily’s cherubic photo, they brought her home.  About a year later, they received a call asking if they would consider adopting a second girl, Ada, with the same medical condition. Their answer was a definitive “Yes.”

They’re now inseparable. Lily is quiet, thoughtful and strong. Ada is an impish ball of energy.

To keep them healthy, “it’s like a weight you put on,” said Clint. “But after awhile, you forget it’s there.”

When the couple learned of the promise of gene therapy, they rushed to put their names on the hospital’s wait list. Friends’ daughters, also adopted from China, had completed the clinical trial and were thriving.

The call came as Alissa was sitting on the family couch, teaching her brood. “I recognized the 510 area code,” she said. “I didn’t hesitate. I said: ‘Yes. When can we come?’ “

“We believe that God has paved a way for us to be here,” she said, pausing for the roar of a passing BART train. “We miss home, but we love how knowledgeable the people here are, and how they treat us as a family.”

Ada went first. From start to finish, the process took four months.

First, her stem cells were collected from her blood. Using a virus, healthy copies of the hemaglobin gene were inserted into these collected cells, then grown for three months.

Chemotherapy killed off the bad stem cells in her bone marrow to make room for the new healthy cells. Her hair fell out. The cells were infused into her body, and found their home in her marrow. They are now beginning to pump out normal hemoglobin.

The beauty of this approach is that patients don’t reject their own bone marrow. And there’s no risk of a dangerous complication caused when foreign cells attack the body’s own tissues.

“You just do the next thing, and the next thing leads you to something else,” said Clint. “Then eventually, holy cow, you’re on the other side of it.”

For the first time in her life, Ada needs no transfusions. While her hemoglobin levels won’t fully stabilize for a year, her spunk is emerging as the disease departs.

Lily’s treatment, delayed by a cell manufacturing error, has now started. It was a major disappointment, because the girls could not be treated together. And instead of staying in Oakland for four months, the family must be here for eight.

The Finlaysons also struggled to gain insurance coverage, and feared medical debt. After two months of daily phone calls with Aetna, coverage is now guaranteed.

“You feel these painful moments and you just want to give up sometimes,” said Alissa. “But we’re blessed to be here. We have an army of family, friends and our church praying for our entire family.”

Impatient with her family’s tale, Ada bounced over, announcing “This is boring to listen to!”

“I don’t really think the magnitude of this has hit them,” Alissa said, offering a hug. “They think getting cured is totally normal.”

Alissa Finlayson, left, offers water to her daughter, Ada, 9, in the patio at Ronald McDonald House where Ada is being monitored after gene therapy for beta thalassemia by UCSF Benioff Children's Hospital in Oakland, Calif., on Wednesday, Oct. 18, 2023. Since treatment in August, Ada no longer needs weekly blood transfusions for her rare genetic blood disorder, which causes severe anemia and potentially fatal organ damage. (Ray Chavez/Bay Area News Group)
Alissa Finlayson, left, offers water to her daughter, Ada, 9, in the patio at Ronald McDonald House where Ada is being monitored after gene therapy for beta thalassemia by UCSF Benioff Children’s Hospital in Oakland, Calif., on Wednesday, Oct. 18, 2023. (Ray Chavez/Bay Area News Group)
]]>
3529980 2023-10-26T14:36:59+00:00 2023-10-26T14:45:18+00:00
How a rare dementia unleashes creativity https://www.bostonherald.com/2023/07/24/how-a-rare-dementia-unleashes-creativity/ Mon, 24 Jul 2023 18:20:06 +0000 https://www.bostonherald.com/?p=3176984&preview=true&preview_id=3176984 Anne Adams was an accomplished scientist. Then, as dementia claimed her brilliant mind, she became an accomplished and resolute artist — painting increasingly beautiful and elaborate works.

During the early stages of her illness, she created complex visual interpretations of classical music, such as George Gershwin’s Rhapsody in Blue and Maurice Ravel’s Boléro. Then she shifted to painting even more abstract concepts, such as numbers.

A recent UC San Francisco-led study of brain scans of Adams and other patients with the deadly “frontotemporal” variety of dementia has revealed the underlying mechanism behind this mysterious shift in creative expression.

As the brain region responsible for language is dying, it activates the visual processing area that drives creativity, according to Dr. Bruce Miller, the senior author of the recent study, a collaboration of 27 scientists published in the journal JAMA Neurology.

Dr Bruce Miller exams Heidi Bonnett (wife of patient) at the UCSF Memory and Aging Center at Mission Bay. (Photo by Steve Babuljak)
Dr Bruce Miller exams Heidi Bonnett (wife of patient) at the UCSF Memory and Aging Center at Mission Bay. (Photo by Steve Babuljak)

“This is a way that the brain copes with an insult,” said Miller, director of the UCSF Memory and Aging Center. “It mobilizes whatever circuits are still available and untouched.”

Similar yet different changes may help explain the mood and behavioral shifts sometimes seen in patients who have had other brain injuries or illnesses, such as stroke or Alzheimer’s disease, he said.

The UCSF research also offers insights into the workings of the healthy brain, engaged in a constant dance — some circuits turning on and others turning off.

On Friday night, Adams’ story — which, uncannily, parallels a similar burst of creativity and mental decline in the composer Ravel a century earlier — will be told on stage at the San Francisco Conservatory of Music in a one-night performance of the play UnRavelled. The performance, produced by the Association for Frontotemporal Degeneration, will be followed by a 30-minute panel discussion on creativity and brain science by UCSF’s Miller and other experts.

“It is a very beautiful, sad story that captures the birth of something extraordinary,” said Miller.

Frontotemporal dementia (FTD), which affects about 60,000 Americans, is different from Alzheimer’s disease. It typically affects people younger — in their 50s and 60s — such as actor Bruce Willis. It doesn’t affect memory; rather, it changes behavior and language. It is incurable, and there are no approved therapies to slow or alter its course.

Scientists previously thought that neurodegenerative diseases hit the brain everywhere, at once. Now they know that they start in a very small and specific region of the brain, targeting certain cells. But over time, the damage spreads and is lethal.

Misfolded proteins build up in the frontal and temporal lobes, disrupting and eventually killing cells called von Economo neurons. This part of the brain does a lot of things — but its most important job is language and social behavior.

A small subset of patients with a specific variant of FTD show a burst of visual creativity as they decline — painting or making montages, pottery, sculpture, jewelry, quilts, even welding colorful insect-like creatures. It is not known why some patients develop creativity and others don’t.

Patients who were artists become more visually obsessed. But even people with no previous interest in art become engaged in their new hobby for many hours a day.

When healthy, UCSF patient Victor Wightman had no interest in art; he enjoyed running, swimming and basketball. But at age 48, a year before his FTD diagnosis, he began painting images of animals and cartoon characters in vivid, almost electric, colors.

Anne Adams with some of her artwork. (Courtesy of UCSF Memory and Aging Center)
Anne Adams with some of her artwork. (Courtesy of UCSF Memory and Aging Center)

Another patient, Jancy Chang, was a talented Santa Cruz artist and teacher. After retirement at age 52 due to declining language skills, her paintings became much bolder, wilder and more original.

A third, Dick Smith, became a constant walker as he declined. He wasn’t experienced in art, and was too restless to focus. But as he circled, caregivers handed him a paint brush. With each restless loop, his colors changed.

Such research can accelerate the search for therapeutics and improve caregiving, said Susan Dickinson, CEO of the Association for Frontotemporal Degeneration.

“Everything we learn about the fundamental aspects of what this disease is, and how it affects the brain, will help us design strategies to intervene, or even prevent, the disease process,” she said. “And it offer clues for ways to help families stay connected with the people they love, helping maintain the quality of life as long as possible.”

“Even if patients don’t become beautifully creative, like Anne Adams did,” Dickinson said, “are there ways to help them stay active and feel purposeful?”

The link between FTD and new artistic talent was first described by Miller in 2007 in the journal Brain. The new UCSF study, led by behavioral neurologist Dr. Adit Friedberg, sought to understand why.

The team analyzed the records of 689 FTD patients and identified 17, or 2.5%, who had experienced a burst in visual creativity at the start of their dementia. It compared the brain scans of these patients to matched patients who did not show increased creativity, as well as the brains of mentally healthy people.

The scans revealed that the region of the frontal cortex, responsible for language, had shrunk in visually creative patients, while areas in the back of the brain on the right side, devoted to visual and spatial processing, were more active.

In healthy people, these visual regions may be inhibited by the dominant frontal cortex, said Miller. But when damaged, creativity is released.

This shift seems to reflect “neuroplasticity” — the ability of the brain to form new connections or reorganize itself, the study concluded. It also found an enlargement in the area of the brain that involves movement of the right hand.

“When one part of the brain doesn’t work as well, other areas may be able to work better than they did before,” said Miller.”

Periodic brain scans at UCSF offered a remarkable glimpse of changes in Anne Adams, from her diagnosis in 1997 until her death in 2007.

Trained in physics and chemistry, she earned a PhD in cell biology while raising four children. She taught and did research at the University of British Columbia, then left her career to take care of an injured son. To pass the time, she turned to art. Her initial works were simple drawings and architectural watercolors.

“She was very bright, and she was also artistic,” said her widower Robert Adams, 83, a professor emeritus of math at the University of British Columbia.

Anne and Robert Adams around 2002, five years before Anne passed away. (Courtesy of Robert Adams)
Anne and Robert Adams around 2002, five years before Anne passed away. (Courtesy of Robert Adams)

Increasingly drawn to repetition and abstraction, her work turned more vibrant. In a rendering of the mathematical ratio pi, she mapped a vivid matrix of its first 1,471 digits.

Her most ambitious piece, which took three months, deconstructed Ravel’s famous song Boléro. The insistent, rhythmic plod of the music — all 340 bars — was transformed into symbols and colors. The A note was painted silver; A-flat, copper; B, leaf green; B-flat, metallic green, and so on.

Just like Boléro‘s melody, her symbols repeated and repeated. With each crescendo, the rectangles grew taller.

Scientists now suspect that in the late 1920s, when Ravel composed Boléro, he also suffered from FTD. A man of order and perfection, his behavior turned erratic. Within several years, he lost the ability to translate music from his mind into notes.

UnRavelling Bolero by Anne Adams, 1994. (Courtesy of UCSF Memory and Aging Center)
UnRavelling Bolero by Anne Adams, 1994. (Courtesy of UCSF Memory and Aging Center)

Soon Anne began to struggle to find words and add numbers. Her paintings grew increasingly symmetrical. Her final works, achieved when she was nearly mute, moved towards photographic realism.

“Painting was something she could do easily,” Adams said. “Every morning, she would come down and go into her office and paint,” eight hours a day.”

Tragically, the illness slowly claimed both Anne’s words and skills. But her drive to paint persisted.

“She got to the stage where she’d come down, sit down at her desk, with the paints in front of her,” said Robert Adams. “And she’d just look at them.”

]]>
3176984 2023-07-24T14:20:06+00:00 2023-07-24T14:23:52+00:00
Stanford team makes electronic skin that can sense touch https://www.bostonherald.com/2023/06/01/stanford-team-makes-electronic-skin-that-can-sense-touch/ Thu, 01 Jun 2023 18:40:05 +0000 https://www.bostonherald.com/?p=3076742&preview=true&preview_id=3076742 Stanford scientists have developed a soft and stretchable electronic skin that can directly talk to the brain, imitating the sensory feedback of real skin using a strategy that, if improved, could offer hope to millions of people with prosthetic limbs.

“We were inspired by the natural system and wanted to mimic it,” said Weichen Wang, whose team published its success in the journal Science. “Maybe we can someday help patients to not only restore motor function, but also restore their sensations.”

Much faster, larger and more sophisticated circuitry is needed before so-called “e-skin” holds promise for people.

But, in a milestone, the device showed remarkable success in a lab rat. When researchers pressed the rat’s e-skin and sent electronic pulses to its brain, the animal responded by twitching its leg.

Scientists have long dreamed of building prosthetic limbs that not only restore movement but also provide perception – sensing pressure, temperature and vibration, for instance — to help restore a more normal quality of life. Skin damage and amputation cause a massive disruption in the loop of perception and movement, so even simple tasks like feeling or grasping an object are challenging.

“If you pick up a glass of beer and you can’t sense that it’s not cold, then you won’t get the right taste,” said Ravinder Dahiya, professor of electrical and computer engineering at Northeastern University in Boston, who is also studying the use of flexible electronics to develop artificial skin.

Electronic skin also could be used to clad robots so they feel sensations in the same way that humans do. This is critical to the safety of industries where robots and humans have physical interactions, such as passing tools on a manufacturing floor.

But the sensation of touch is complicated. Human skin has millions of receptors that sense when they are poked or pressed, squeezed or scalded. They react by sending electrical pulses to the brain, through nerves. The brain responds by sending information back, telling muscles to move.

And biological skin is soft and can stretch, repeatedly, for many decades.

The Stanford team, led by chemical engineering professor Zhenan Bao, has been working on e-skin designs for several years. But an earlier effort used rigid electronics and 30 volts of power, which requires 10 batteries and isn’t safe. And it wasn’t able to endure continuous stretching without losing its electrical properties.

“The hurdle was not so much finding mechanisms to mimic the remarkable sensory abilities of human touch, but bringing them together using only skin-like materials,” said Bao, in a statement.

The new e-skin is innovative because it uses networked layers of stretchable organic transistors that perceive and transmit electrical signals. When sandwiched, the layers are only about 25 to 50 microns thick – as thin as a sheet of paper, similar to skin.

Its networks act as sensors, engineered to sense pressure, temperature, strain, and chemicals. They turn this sensory information into an electrical pulse.

And the e-skin runs on only 5 volts of electricity.

To test the system, the Stanford team implanted it into a live rat. When the rat’s e-skin was touched, a pulse was transmitted by a wire to the rat’s brain – specifically, an area called the somatosensory cortex, which is responsible for processing physical sensations.

The rat’s brain responded by sending an electrical signal down to its leg. This was done using a device that amplifies and transmits signals from the brain to muscles, mimicking connections in the nervous system called synapses.

The rat’s leg twitched. Significantly, its movement corresponded to varying levels of pressure, said Wang, an engineering PhD and first author on the new paper. For example, the team could increase the leg’s movement by pushing the e-skin harder, which boosted the signal’s frequency and the transistor’s output.

If tested in humans, the device would not require implantation of a wire to send sensory information to the brain. Rather, the team envisions using wireless communication between e-skin and an electrical stimulator located next to a nerve.

Photo of a soft e-skin attached to a finger. The biointegrated e-skin system consists of a temperature sensor, a pressure sensor, and two sets of RO-ED integrated circuits.. (Photo by Jiancheng Lai, Rui Ning)
Photo of a soft e-skin attached to a finger. The biointegrated e-skin system consists of a temperature sensor, a pressure sensor, and two sets of RO-ED integrated circuits.. (Photo by Jiancheng Lai, Rui Ning)

Joe McTernan of the American Orthotic and Prosthetic Association said such research encourages technological advancements that could someday provide real-time biofeedback for people who have lost limbs.

“Although this skin technology is fairly new, there has been significant research and development in recent years that have focused on creating a positive tactile experience for the patient,” he said.

The Stanford team’s closed-loop system — from sensation to muscle movement — is “very exciting…very much a proof of concept,” bioelectronics expert Alejandro Carnicer-Lombarte of University of Cambridge told the journal Nature.

In the field of artificial prosthetics, most researchers tend to work on individual components, he said. “Combining those things, in sequence, is not trivial.”

Dahiya applauded the team’s success in building flexible electronics and then making them work. “That’s where they’ve done a nice job,” he said.

This graphic gives a simple overview of how electronic skin imitates biological skin and might someday work in humans.But he said there’s still a missing piece of the puzzle: creating memory. Unlike Stanford’s e-skin, human skin learns how an object feels, then can anticipate it.

There’s another challenge: The transmission of signals is currently too slow to be useful. The flow of information through the team’s flexible carbon-based transistors is sluggish compared to more traditional silicon-based transistors, he said.

Such a delay “will not allow us to get a real feeling,” Dahiya said. “And without real feeling, then you have a practical bottleneck.”

At Stanford, the next step is to pack more and different sensors into the e-skin, to more closely replicate the many sensations felt by the human hand, said Wang.

“We’re scaling up,” he said. “It will be more advanced.

“The whole field is under development,” he said. “It will take many more generations of developments to realize our target.”

]]>
3076742 2023-06-01T14:40:05+00:00 2023-06-02T08:23:40+00:00
How your car can power your home https://www.bostonherald.com/2023/04/17/how-your-car-can-power-your-home/ Mon, 17 Apr 2023 21:27:01 +0000 https://www.bostonherald.com/?p=3002096&preview=true&preview_id=3002096 Even as fierce winter winds knocked out power to thousands of Bay Area homes, Tammy Snyder’s rural storm-battered house remained bathed in brightness.

Her plug-in hybrid Chevy Volt, linked to the house by long extension cords, powered her family’s favorite lamp, as well as the refrigerator, internet and furnace. It charged the batteries that run her phone, laptop, electric blanket, camp light, flashlights, power tools and a comfy heating pad that wraps around her shoulders.

“It’s turned outages into slight inconveniences, rather than the hardships they used to be,” said Snyder, a 62-year-old who radiates practicality. Her family’s scenic Santa Cruz Mountains home is more than a dozen miles away from the comfort of the nearest town — and lost PG&E power 13 times this winter, once for eight days and another for six days.

Her homespun setup is a preview of what may soon be easily available to many Californians: EVs that are equipped not just to receive power, but also to deliver it.

A new bill, proposed last month by State Sen. Nancy Skinner, D-Berkeley, would require that all new electric vehicles in California are equipped with so-called “bidirectional” charging by 2027. Passage of SB 233, which will be heard tomorrow before the Senate Energy Committee and on April 25 before the Senate Transportation Committee, could make two-way charging the norm, not a special feature.

“EVs are energy storage on wheels. Why waste that battery, given how few miles most people use the vehicle in any given day?” said Skinner, whose initiative was a major focus at this week’s California Climate Policy Summit in Sacramento. “But we need to make it as easy as possible.”

Electric car batteries can hold approximately 60 kilowatt hours of energy, enough to provide backup power to an average U.S. household for two to three days — or far longer, if the home’s electrical use is conserved.

Skinner’s effort comes as the Biden administration sets the stage for a major national expansion of EV use. On Wednesday, the EPA proposed strict new limits on emissions that would require as many as two-thirds of new vehicles sold in the U.S. to be electric by 2032. That’s a nearly tenfold increase over current electric vehicle sales.

California is already far ahead. Last year, 16.3% of new vehicle sales in the state were electric vehicles, far outpacing the nationwide rate of 5.8%. California is projected to have at least 8 million EVs on the road by 2030.

Meanwhile, state residents face a growing threat of rolling blackouts as the power grid is overtaxed during periods of peak demand, such as during the heat wave on Sept. 6, 2022, that brought outages to Alameda and Palo Alto. This winter’s parade of atmospheric rivers also caused widespread power losses.

By harnessing the untapped battery storage capacity of electric vehicles, California can address three challenges at once: cleaning up the air while keeping the lights on and reducing energy bills, according to Ellie Cohen, CEO of The Climate Center, based in Santa Rosa.

As the state moves into an all-electric future, “bidirectional vehicles can play a huge role to get to where we need to go, faster,” she said.

  • Tammy Snyder demonstrates the illumination power of her headlamp used...

    Tammy Snyder demonstrates the illumination power of her headlamp used during power outages while in the kitchen of their home in unincorporated Santa Cruz County, Calif., on Saturday, April 8, 2023. During this winter’s 14 major power outages in the Santa Cruz Mountains, Tammy Snyder put her Chevy Volt car to use, enlisting its battery to power her refrigerator, computers, phones, fan, air filters, hall lights, favorite kitchen lamp, the electric blanket for her bed and even a heat pad for her shoulders. (Jose Carlos Fajardo/Bay Area News Group)

  • Tammy Snyder goes through her inventory of rechargeable devices used...

    Tammy Snyder goes through her inventory of rechargeable devices used during power outages while at their home in unincorporated Santa Cruz County, Calif., on Saturday, April 8, 2023. During this winter’s 14 major power outages in the Santa Cruz Mountains, Tammy Snyder put her Chevy Volt car to use, enlisting its battery to power her refrigerator, computers, phones, fan, air filters, hall lights, favorite kitchen lamp, the electric blanket for her bed and even a heat pad for her shoulders. (Jose Carlos Fajardo/Bay Area News Group)

  • A view looking southwest towards the ocean and the city...

    A view looking southwest towards the ocean and the city of Capitola as seen near the home of Tammy and Robert Snyder in unincorporated Santa Cruz County, Calif., on Saturday, April 8, 2023. During this winter’s 14 major power outages in the Santa Cruz Mountains, Tammy Snyder put her Chevy Volt car to use, enlisting its battery to power her refrigerator, computers, phones, fan, air filters, hall lights, favorite kitchen lamp, the electric blanket for her bed and even a heat pad for her shoulders. (Jose Carlos Fajardo/Bay Area News Group)

  • Tammy Snyder demonstrates the illumination power of her headlamp used...

    Tammy Snyder demonstrates the illumination power of her headlamp used during power outages while at their home in unincorporated Santa Cruz County, Calif., on Saturday, April 8, 2023. During this winter’s 14 major power outages in the Santa Cruz Mountains, Tammy Snyder put her Chevy Volt car to use, enlisting its battery to power her refrigerator, computers, phones, fan, air filters, hall lights, favorite kitchen lamp, the electric blanket for her bed and even a heat pad for her shoulders. (Jose Carlos Fajardo/Bay Area News Group)

  • Tammy Snyder, center, with her husband Robert Snyder, right, and...

    Tammy Snyder, center, with her husband Robert Snyder, right, and their daughter Kat Snyder, have found a way to keep the electricity flowing at their home during power outages with the use of their Chevy Volts in unincorporated Santa Cruz County, Calif., on Saturday, April 8, 2023. During this winter’s 14 major power outages in the Santa Cruz Mountains, Tammy Snyder put her Chevy Volt car to use, enlisting its battery to power her refrigerator, computers, phones, fan, air filters, hall lights, favorite kitchen lamp, the electric blanket for her bed and even a heat pad for her shoulders. (Jose Carlos Fajardo/Bay Area News Group)

of

Expand

California’s cars will have 60,000 megawatts of stored energy in batteries by 2030, according to Siva Gunda of the California Energy Commission. If only 10% of that could be returned to the grid, “we can get through what we went through last year without turning on the backup generators,” said Gunda.

Now most EVs have one-direction charging. Power is taken from the grid and charges the car’s battery.

Only the Nissan Leaf, Kia EV-6, Hyundai Ioniq 5 and Ford F-150 Lightning offer built-in “bidirectionality” to homes or the grid. Tesla recently announced that its vehicles will be “bidirectional” by 2025.

PG&E strongly supports the move toward bidirectional vehicles, saying it is preparing the grid. “It represents a new path. We want to lead the country in reliability, resiliency and reduced emissions,” said Aaron August, vice president of PG&E’s Utility Partnerships and Innovation

But the state is not yet ready for immediate widespread adoption, said PG&E and other experts.

Procedural and regulatory changes are required before EV backup power becomes an everyday thing, said Jackie Piero of the Belmont-based company The Mobility House, which provides the technology that lets electric AC Transit buses power the Oakland Public Library during emergencies. “Smart meters” or other tools would be needed during outages to ensure that utility workers aren’t injured by a car’s energy, she said.

Standards, now in development, would help the grid protect itself, said PG&E’s August. Standards are also being designed to align how chargers talk to the car. For instance, Nissan and Ford currently use different strategies, requiring consumers to purchase different equipment.

Until then, resourceful “hackers” like Snyder have built their own bidirectional systems. A stay-at-home mom with a background in math and computer science, she loves nature, dancing, 5,000-piece jigsaw puzzles — and self-sufficiency. A neatly organized cart in her home holds eight 40-volt batteries, six 18-volt batteries, two 40-volt inverters and two 18-volt inverters.

The centerpiece of her EV setup is a 1500-watt inverter, which converts the car battery’s DC power to the AC power needed by her home. Bright blue, the inverter cost $220 and lives in the trunk of her car, a 2017 model.

  • A view of a 1,500 watt power inverter located in...

    A view of a 1,500 watt power inverter located in the trunk of a 2017 Chevy Volt owned by Tammy Snyder while at their home in unincorporated Santa Cruz County, Calif., on Saturday, April 8, 2023. During this winter’s 14 major power outages in the Santa Cruz Mountains, Tammy Snyder put her Chevy Volt car to use, enlisting its battery to power her refrigerator, computers, phones, fan, air filters, hall lights, favorite kitchen lamp, the electric blanket for her bed and even a heat pad for her shoulders. (Jose Carlos Fajardo/Bay Area News Group)

  • Tammy Snyder plugs an electrical power cord into a 1,500...

    Tammy Snyder plugs an electrical power cord into a 1,500 watt power inverter located in the trunk of her 2017 Chevy Volt while at their home in unincorporated Santa Cruz County, Calif., on Saturday, April 8, 2023. During this winter’s 14 major power outages in the Santa Cruz Mountains, Tammy Snyder put her Chevy Volt car to use, enlisting its battery to power her refrigerator, computers, phones, fan, air filters, hall lights, favorite kitchen lamp, the electric blanket for her bed and even a heat pad for her shoulders. (Jose Carlos Fajardo/Bay Area News Group)

  • Electrical cords poke out from the trunk of a 2017...

    Electrical cords poke out from the trunk of a 2017 Chevy Volt at the home of Tammy Snyder in unincorporated Santa Cruz County, Calif., on Saturday, April 8, 2023. During this winter’s 14 major power outages in the Santa Cruz Mountains, Tammy Snyder put her Chevy Volt car to use, enlisting its battery to power her refrigerator, computers, phones, fan, air filters, hall lights, favorite kitchen lamp, the electric blanket for her bed and even a heat pad for her shoulders. (Jose Carlos Fajardo/Bay Area News Group)

  • Tammy Snyder turns on her car before plugging an electrical...

    Tammy Snyder turns on her car before plugging an electrical power cord into a 1,500 watt power inverter located in the trunk of her 2017 Chevy Volt while at their home in unincorporated Santa Cruz County, Calif., on Saturday, April 8, 2023. During this winter’s 14 major power outages in the Santa Cruz Mountains, Tammy Snyder put her Chevy Volt car to use, enlisting its battery to power her refrigerator, computers, phones, fan, air filters, hall lights, favorite kitchen lamp, the electric blanket for her bed and even a heat pad for her shoulders. (Jose Carlos Fajardo/Bay Area News Group)

of

Expand

The inverter hooks up, via cables, to the car’s 12-volt battery, which is propelled by the car’s big battery. It also connects to two long extension cords, 15 amps each, which are routed down the driveway to her home. One cord runs through a kitchen window to a power strip, supporting appliances and recharging batteries. The other cord runs into a closet, supporting the furnace and internet router.

“They’re just consumer electronics,” she said. “It only takes about five minutes. It’s easy.”

She doesn’t want the car to think it’s not really going anyplace. So she fools it. To keep it from automatically turning off, she enlists what she calls “the rubber band trick,” using three blue rubber bands around the gearshift button to hold it in place.

Snyder’s effort reveals the commitment of Californians to create greater reliability in an all-electric world, said Kurt Johnson of the Climate Center.

But simplicity is essential, he said, for many more residents to reap the potential of this approach.

“I want to live in a world where, if the grid needs power when I get home, I just plug in my car,” he said.

]]>
3002096 2023-04-17T17:27:01+00:00 2023-04-17T17:36:22+00:00
Two dads, one baby? Gene technique works in mice https://www.bostonherald.com/2023/04/10/two-dads-one-baby-gene-technique-works-in-mice/ Mon, 10 Apr 2023 19:57:19 +0000 https://www.bostonherald.com/?p=2990833&preview=true&preview_id=2990833 For the first time in history, scientists have created mice with two dads, foretelling a day when same-sex couples may be able to have biological children of their own.

The success, announced by Japanese researchers last month, has not yet been tried on people.

But scientists at two Bay Area startups, as well as a company in New York City and another in Japan, are striving to move the mouse research into humans, and rewrite the rules of reproduction by making sex cells in a lab. If successful in people, the technique would allow the creation of an egg cell from blood or a tiny sliver of a man or woman’s skin.

So far, the research has focused on making egg cells, which would enable male-male reproduction. Creating sperm for female-female reproduction is a tougher scientific challenge.

“Even the remote possibility of same-sex couples creating a baby without a donor is extraordinary and exciting,” said Drew Lloyd, board president of the Bay Area Municipal Elections Committee, which advocates for the civil rights of LGBTQ people. “I’ve learned not to put limits on what’s possible.”

Both Bay Area companies are secretive about the progress of their research and would not consent to interviews. The Berkeley-based startup Conception, with 34 employees and at least $20 million in private funding, seeks to create human eggs using stem cells from human blood samples. The other company, San Francisco’s Ivy Natal, aims to build eggs with a skin biopsy.

The new research, described by Katsuhiko Hayashi of Osaka University in the March 15 issue of the journal Nature, marks a milestone in reproductive biology.

The Japanese team guided stem cells from a male mouse to form eggs, which were fertilized by another male mouse. The two mice conceived seven pups who were healthy and fertile, eventually conceiving babies of their own.

But the project’s success rate was extremely low. About 30% of the male mouse’s stem cells matured into eggs, and 40% of those eggs were successfully fertilized to create embryos. The embryos were transferred to a surrogate female mouse to gestate, but only 1% — 7 out of 630 — were born alive.

Experts said it is not yet known whether the strategy would work in humans.

“Mice aren’t people,” said Hank Greely, director of the Center for Law and the Biosciences at Stanford University. “And it’s a complicated method.”

UC San Francisco developmental biologists Jonathan Bayer and Diana Laird agreed, writing “we have much to learn before we use cultured stem cells to make human eggs in a dish,” in an article that accompanied the Nature paper.

The technique, called in vitro gametogenesis or IVG, builds on the Nobel Prize-winning work of Dr. Shinya Yamanaka, a biologist at Japan’s Kyoto University who is also affiliated with San Francisco’s Gladstone Institute. In 2007, Yamanaka described how to create stem cells by reprogramming skin cells, turning them into “induced pluripotent stem cells,” or iPSCs. These iPSCs can be coaxed into becoming nearly any cell type in the human body, from brain to liver — and perhaps, someday, human egg or sperm.

The latest work was technically complex and required many steps. First, the team took skin cells from the tail of an adult male mouse. Then it reprogrammed these skin cells to become stem cells.

The biggest challenge was converting these stem cells from male to female. Because the production of mature eggs requires two copies of the X chromosome, the authors devised a way to find rare male stem cells that jettison their Y chromosome and then duplicate their X chromosome.

Once chromosomally female, these cells were biochemically nudged to turn into immature eggs.

The team tried, but failed, to make sperm from female cells. So two female mice could not conceive together. That’s because there’s not yet a successful technique for converting a cell with two X chromosomes into a Y chromosome — and without a Y chromosome, no sperm can be made.

In 2017, researchers in China created healthy mice with two mothers, but it involved a tremendous amount of gene editing with CRISPR, making it impractical to use for anything other than research. They also made mice with two dads, but the offspring quickly died.

But the breakthrough opens up exciting new avenues in reproductive biology and fertility research.

For instance, it could be used to rapidly produce inbred strains of identical mice, useful for laboratory experiments. It also offers a strategy to propagate endangered mammals from a single male.

It could also make replacement eggs for older women to have children, as well as couples who are infertile due to congenital problems, an accident, disease or treatment such as chemotherapy. 

And it would offer same-sex or transgender couples the chance to have their own biological children. Currently such couples must use the eggs or sperm from one person, and the eggs or sperm from a donor.

Adoptive parent Johnny Symons, professor in the School of Cinema at San Francisco State University whose documentary film Daddy & Papa focuses on the experience of gay men raising children through adoption and surrogacy, called family-building “an incredibly personal decision.”

“Having biological families has been least accessible to us,” he said. “This technology stands to be a real breakthrough in terms of providing options for people who want that.”

“If the technology advances, it could really change societal perceptions of gay men as parents, and potentially legitimize us in a new way,” said Symons. “There’s something very powerful and undeniable about physical resemblance. … It makes it harder for people who oppose us to deny us political rights or equal social standards.”

But there’s a darker side to making sex cells in the lab, said Greely, author of the 2016 book, “The End of Sex and the Future of Human Reproduction.”

“If this worked,” he said, “you could make eggs from sperm from 8-year-olds. You could make eggs from sperm from fetal remains. You could make eggs from sperm from somebody who has been dead for years, but whose cells were frozen. That gets a little weird.”

Someday, perhaps, it may be possible to create both eggs and sperm from the same person, creating what Greely calls a “unibaby.”  “You’re pregnant — by yourself,” he said. “I can’t imagine a good reason to do this.”

Even if the technique works in humans, it must first be proven safe, experts agree. Created through genetic manipulation, embryos may have hidden defects. There must be wider societal debate and regulatory oversight.

The next step is to test the technique in monkeys or chimpanzees.

Fertility experts, such as the American Society for Reproductive Medicine’s Research Institute, think it’s on the horizon.

“If we can do this properly and safely and we can bring the cost down to being something accessible for everyone,” said Conception CEO Matt Krisiloff in a company video, “I really think there’s a possibility that this could become the default way people choose to have children.”

]]>
2990833 2023-04-10T15:57:19+00:00 2023-04-10T16:06:28+00:00
Here’s how facial recognition is changing travel through Bay Area airports https://www.bostonherald.com/2023/03/08/heres-how-facial-recognition-is-changing-travel-through-bay-area-airports/ Wed, 08 Mar 2023 13:45:31 +0000 https://www.bostonherald.com/?p=2937604&preview=true&preview_id=2937604 For speedier entry into the U.S., your most important travel tool is now your face.

All three of the Bay Area’s airports are deploying new facial recognition technology, called Simplified Arrival, to screen incoming international passengers and testing it in San Jose to track some departing passengers too. It’s catching imposters and processing travelers more efficiently — but also raising privacy concerns.

“You get instant verification,” said James Hutton of U.S. Customs and Border Protection on a recent morning as hordes of bleary-eyed travelers streamed through San Francisco International Airport’s immigration control booths and paused for a snapshot.

“The camera does immediate identification,” he said, “telling the customs officer that, ‘This is the person that’s in front of me.’ “

A US customs officer at San Francisco International Airport processes arriving passengers with the use of a camera connected to a facial comparison technology called "Simplified Arrival," Wednesday, Dec. 14, 2022. (Karl Mondon/Bay Area News Group)
A US customs officer at San Francisco International Airport processes arriving passengers with the use of a camera connected to a facial comparison technology called “Simplified Arrival,” Wednesday, Dec. 14, 2022. (Karl Mondon/Bay Area News Group)

The old approach we’ve long relied on — passport scanning and stamping — has vanished.

Instead, in a major overhaul of its strategy of processing travelers, government officials have installed cameras next to customs officers at all 238 international airports, 13 seaports and every pedestrian and bus processing facility along the nation’s northern and southern land borders. The new technology was introduced at Bay Area airports in 2020 and completed at all ports of entry nationwide last June.

TSA agents are testing similar devices for departing flights at some security check-in lines at San Jose International Airport and others — a “curb to gate” approach that uses the passenger’s face as a boarding pass.

“Your face is matched to the document that’s tied to your reservation,” easing the process of boarding passengers, said Hutton. “If we can verify that the person who went through TSA screening is the same person at the gate, you would never have to take your passport out of your pocket.”

It’s a far cry from the instantaneous-everywhere facial recognition portrayed in many popular TV crime shows, but biometric technology, which uses an individual’s unique physical traits to verify their identity, is increasingly used by private businesses and law enforcement.

Facial recognition is already a familiar part of smartphones, supplanting passwords. Most banks use “FaceID” to let customers securely log onto mobile banking apps. Target, Walmart and Lowe’s are experimenting with facial recognition to combat shoplifting and fraud, identifying known thieves.

At the nation’s borders, cameras started replacing self-serve passport kiosks in 2019 after a Congressional mandate, funded in 2016, directed the Department of Homeland Security to record the entry and exit of all foreign nationals. The effort, first tested at pedestrian crossing lanes in San Ysidro, is intended to prevent terrorism and find people who overstay their visas.

The pandemic accelerated the technology’s adoption, offering a “touchless” way to process passengers. Officials don’t have to scan a passport or clean a kiosk.

“This approach makes sense from a national security perspective,” said Stephen Flynn, founding director of the Boston-based Global Resilience Institute at Northeastern University.

A US customs officer at San Francisco International Airport processes arriving passengers with the use of a camera connected to a facial comparison technology called "Simplified Arrivals," Wednesday, Dec. 14, 2022. (Karl Mondon/Bay Area News Group)
A US customs officer at San Francisco International Airport processes arriving passengers with the use of a camera connected to a facial comparison technology called “Simplified Arrivals,” Wednesday, Dec. 14, 2022. (Karl Mondon/Bay Area News Group)

“Border control efforts at ports of entry have always been a needle-in-the-haystack challenge, given the volume, velocity and variety of people, conveyances and goods moving through the world’s airports, seaports and border crossings.”

But civil liberties and digital privacy groups said the technology represents a fundamental threat to privacy.

“We see this continual expansion of facial recognition into more and more areas of our lives. And we are giving in to it with the promise that it somehow will make our experience more convenient,” said Albert Fox Cahn, executive director of the New York-based Surveillance Technology Oversight Project.

“Once you have someone’s biometric information, you have it for life,” he said. “You can change your credit card number. You can change your Social Security number. But you can never change your face. And so even if a program is only tracking our faces for one purpose today, it’s creating the biometric infrastructure to track it — however agencies may want to — in future years.”

Compared to fingerprinting, face-recognition technology poses a greater potential for growth into spy tools, critics say. That’s because it can be used for surveillance through public video cameras — mapping a person’s movement without their knowledge or consent.

Studies also suggest the technology is racially biased, with error rates rising significantly when applied to people of color, according to Jay Stanley, senior policy analyst with the ACLU Speech, Privacy, and Technology Project.

How does the new system work?

When entering the U.S. by plane and arriving at a Customs booth, a camera photographs your face. Then a computer checks that photo against all the images in a photo “gallery” of everyone else on your incoming flight. That’s possible because airlines are required to submit a list of passengers — and your fellow travelers already have submitted their photo to the U.S. government, either on a passport or a visa.

If your new photo matches your database photo, you don’t have to hand over your passport. The National Institute of Standards and Technology recently found that facial biometrics are nearly 99% accurate.

“That allows your officer to focus on questions: ‘Why are you coming into the United States? What’s the purpose of your trip? How long are you staying?’ ” said Hutton. “That interview doesn’t get supplanted, but it makes the officer more efficient.”

If you want your passport stamped, you can still request it. But most passengers are directed to an online site to get a copy of their arrival record.

The line-skipping system Global Entry also uses facial comparison technology.

If your photos don’t match, the system reverts to the traditional process: Officials look at your face, ask you to swipe your passport and may require that you submit fingerprints. They may ask tougher questions: “Where did you go to school? What was your school mascot?”

Passport photos are almost impossible to manipulate because images are stored in a chip. Already the system has stopped around 1,800 “impostors” — someone using a stolen, borrowed or counterfeit passport — from entering the country, according to Hutton.

After scanning at entry, photos of U.S. citizens are deleted within 12 hours. Photos of foreign nationals are permanently stored in a secure U.S. Department of Homeland Security system.

Americans can opt out, asking an agent to verify their identity the original way. There are exemptions for minors under age 14 and elders over age 80.

But every foreign national is required to participate. They may also be asked for fingerprints if they’ve never entered the U.S. before.

In the future, there may be no need to pose for a photo. Instead, your image may be taken soon after passengers get off the plane or boat, further streamlining the process, said Hutton.

“The ultimate vision is that there are cameras in the hallway,” said Hutton. “As you walk up, cameras would take a photo that says, ‘Oh, yes, that’s Ryan, coming back from Narita, Japan.’ “

]]>
2937604 2023-03-08T08:45:31+00:00 2023-03-08T17:46:27+00:00
Omicron vs. Delta: Comparing COVID’s most worrisome variants https://www.bostonherald.com/2021/12/03/omicron-vs-delta-comparing-covids-most-worrisome-variants/ https://www.bostonherald.com/2021/12/03/omicron-vs-delta-comparing-covids-most-worrisome-variants/#respond Fri, 03 Dec 2021 13:45:05 +0000 https://www.bostonherald.com?p=2482445&preview_id=2482445 Since the COVID-19 virus first appeared in December 2019, thousands of variants have emerged — but, until this month, Delta reigned supreme.

The arrival of Omicron — with the first U.S. case detected in San Francisco on Wednesday and more in New York, Minnesota and Colorado a day later — is a reminder that Delta isn’t the endgame.

How do COVID-19’s two most recent and worrisome variants compare? Here’s a snapshot of what we know.

Mutations

Omicron has the most mutations of any variant of SARS-CoV-2, the virus that causes COVID-19. We still have to learn how those genetic changes behave. But they take hold for a reason — because they help a variant excel.

Delta: It has 13 mutations. Of these, nine are in the spike protein, the protrusion on the surface of the virus that helps it latch onto human cells. Specifically, two are in a molecular hook, called the “receptor-binding domain,” helping it cling to cells more tightly, according to Suresh V. Kuchipudi of Penn State University, who studies viral evolution.

Omicron: It’s a mutation monster — at least 32 are in the spike protein and 10 in the receptor-binding domain.

While it kept many of the most successful mutations found in earlier variants, including Delta, it also possesses changes found nowhere before.

What are all of these mutations doing? There’s not enough information yet to say whether they’ll make omicron worse than Delta. What really matters here is the combination of mutations and not any single mutation on its own, according to Kristian Andersen, an infectious disease researcher at Scripps Research.

But here’s a clue: Because so many are on the spike protein, they may enhance the variant’s ability to infect cells and evade immunity.

Contagion

As the world discovered with Delta, higher transmissibility puts unvaccinated individuals at great risk.

Delta: On average, the original SARS-CoV-2 virus spread from one person to two or three. Delta changed that — infecting about six people. And Delta has an incubation period of only four days, faster than the six days seen in the original virus, so people are more quickly contagious.

Omicron: We don’t yet know its transmission rate or incubation period. We’ll know more about the variant’s growth rates in different geographies within the next few weeks.

But the rapid increase in cases across South Africa is concerning — and suggests that Omicron is outcompeting Delta in that nation, said Trevor Bedford, an expert on viral evolution and surveillance at the Fred Hutchinson Cancer Research Center in Seattle.

That does not necessarily mean that Omicron is intrinsically more transmissible than Delta. Instead, It could be better at escaping our immune defenses.

Immune escape

A variant that can evade our antibodies puts previously infected and vaccinated individuals at risk. But that’s not devastating news, because vaccines can be re-designed to be more protective.

Delta: This variant acquired some mutations that allows it to evade vaccine-induced antibodies — which explains, in part, the problem of vaccine “breakthroughs.”

But there’s been little evidence of increased reinfection risk associated with Delta. The antibodies created by older strains were effective in protecting people.

Omicron: It shares similar mutations with the earlier Beta and Gamma variants, which are more resistant to vaccination than Delta. We’ll know much more about this risk in several weeks, when lab work is done. Scientists are particularly interested in comparing Omicron’s fate against the antibodies made by people who only got two doses of vaccine — versus those who got two doses, plus a booster.

But the Omicron infection in a vaccinated San Francisco resident suggests that two doses, alone, won’t protect us. Additionally, a newly released study of epidemiological data from South Africa shows a three-fold increase in risk for reinfection due to Omicron, when compared to Delta.

Emergence

Delta: First identified in India in December 2020, Delta is presumed to have come from someone whose immune system was suppressed, perhaps due to medications or an illness such as HIV/AIDS.

Omicron: Based on the branching of its genetic tree, experts believe Omicron is relatively young, with most estimates placing its emergence in mid-October. According to the journal Science, Omicron did not develop out of one of the earlier variants of concern, such as Alpha or Delta. Instead, it seems to have evolved in parallel — and Omicron is so different from other variants that pinpointing its closest relative is difficult, according to the journal Science.

Severity of illness

Andersen calls this “the million dollar question.”

Delta: A report this summer found that people in England with Delta had double the hospitalization risk of those with an earlier variant. And Delta killed huge numbers of people simply because it infected so many more.

Omicron: We don’t yet know about Omicron’s virulence. In South Africa, cases are rising faster than hospital admissions — a hint of less severe disease. And even though hospital admissions have increased, so far there is no increase in use of ICU beds.

That may be because cases of Omicron, so far, are in predominantly younger people. It could also suggest that in vaccinated and previously infected people, the body’s “memory” immunity is kicking in.

But if reinfections or “breakthrough” infections cause hospitalizations, that’s bad news. It suggests our antibodies aren’t protective.

Scientists are keeping a close eye on what happens to cases and hospitalizations over the next few weeks, according to Andersen — especially in places like the U.S., with a medium vaccination rate; the U.K., with a high vaccination rate; and Israel, with one of the world’s highest vaccination and booster rates.

]]>
https://www.bostonherald.com/2021/12/03/omicron-vs-delta-comparing-covids-most-worrisome-variants/feed/ 0 2482445 2021-12-03T08:45:05+00:00 2021-12-05T22:02:17+00:00
How the new one-dose COVID-19 vaccine compares to Pfizer and Moderna https://www.bostonherald.com/2021/02/26/how-the-new-one-dose-covid-19-vaccine-compares-to-pfizer-and-moderna/ https://www.bostonherald.com/2021/02/26/how-the-new-one-dose-covid-19-vaccine-compares-to-pfizer-and-moderna/#respond Fri, 26 Feb 2021 14:05:17 +0000 https://www.bostonherald.com?p=2279035&preview_id=2279035 A COVID-19 vaccine produced by Johnson & Johnson — the company best known for producing band aids — is safe and effective, according to a Food and Drug Administration review released Wednesday, paving the way for a third U.S. vaccine.

If approved after a review by the FDA’s Vaccines and Related Biological Products Advisory Committee, the vaccine could be authorized as soon as Saturday. The company plans to begin shipping immediately.

While not quite as effective as existing Pfizer and Moderna vaccines, it has two huge advantages. It’s easy to store and ship. And it works after only one shot.

“It’s not the world’s best at preventing you from becoming infected or developing minor respiratory symptoms,” according to Dr. Warner Greene, professor of medicine at UCSF and the founding and emeritus director of Gladstone Institute of Virology and Immunology. “You may have a runny nose or a mild upper respiratory tract infection.

“But this vaccine protects you from severe disease — having to go to hospital and dying. And frankly, that’s what we want from a vaccine. That is fantastic,” he said. “I’d sign up for that type of vaccine any day.”

Here’s what to know about this new vaccine:

Q: How effective is it?

A: In U.S. trials, the Johnson & Johnson vaccine provided complete protection against COVID-19 death. It showed 86% efficacy against severe forms of the disease. The overall efficacy rate in the U.S. was 72 % in the United States.

The efficacy rates of Moderna and Pfizer vaccines are higher — both around 95%. But comparing the three vaccines is challenging because of differences in the designs and dosing regimens of the clinical trials, say experts.

Q: Can the new vaccine defend against dangerous variant viruses?

A: There is good news on that front.

The vaccine’s effectiveness was not influenced by the high prevalence of a variant in Brazil. In South Africa, with a different variant virus, the vaccine reduced severe or critical COVID-19 by 81.7% starting 28 days after vaccination. It was 64% effective against more moderate disease. Last week, the South African government switched to J & J’s vaccines, instead of using Novavax or AstraZeneca vaccines.

Because Pfizer and Moderna’s vaccines were tested before the emergence of these troubling new variants, it’s not entirely clear how well they will work.

Q: Is there a plan if it fails to work against a variant?

A: Yes, it can be adjusted, or ‘boosted.’

It’s relatively easy to modify all three vaccines. With the Pfizer and Moderna vaccines, scientists just synthesize a different strand of messenger RNA, said Georgetown University virologist Angela Rasmussen on the “Track the Vax” podcast. It is a little harder to manufacture a different viral vector vaccine, like J&J’s.

“It may be… that people who got vaccinated initially with Johnson & Johnson might be getting a Pfizer or Moderna booster that addresses the variant,” she said.

Q: Are there side effects?

A: Side effects seem milder – and there were no reports of anaphylaxis.

All three vaccines have modest side effects, such as pain at the injection site, fatigue, headache, muscle pain, and joint pain. This doesn’t mean they’re unsafe. Rather, it shows that the immune system is kicking into gear.

Unexpected side effects for the J & J vaccine occurred at the same rate overall among volunteers who received vaccine and placebo — about 0.5%. A few rare conditions appeared more common with the vaccine, such as blood clot-related conditions or tinnitus, a ringing in the ears.

Significantly, no one suffered a severe allergic reaction called anaphylaxis, which is seen in Pfizer and Moderna vaccines.

That means that people who get the J&J vaccine might not have to be monitored for 15 minutes after injection – easing and speeding up clinics.

Q: How does it work?

A: The J&J vaccine uses a harmless virus, called an adenovirus, to carry the genetic code.

The Pfizer and Moderna vaccines are made using messenger RNA, or mRNA, a technology that delivers a bit of genetic code to cells.

In all three vaccines, this code acts like a recipe to make a protein, called a spike. Our body sees this spike protein as an invader and triggers the immune system, producing antibodies and T cells.

If the body later encounters the actual COVID-19 pathogen, it is able to respond faster and more effectively, as immune cells and antibodies specific to the virus are produced rapidly in the body to prevent disease.

Q: What is the advantage to J&J’s approach?

A: It makes it a simple one-dose shot.

The J&J vaccine is the first vaccine to show efficacy given as a single dose. That’s a huge advantage when it comes to vaccinating as many people as possible, especially in rural areas.

“We can set up more mobile units – ‘pop ups’ — that can really help get vaccine into the venues where some of our hard-to-reach populations are,” said Dr. Virginia A. Caine, director of Indiana’s Marion County Public Health Department, at a CDC forum on Wednesday. “This will give us access where we might not have had it before.”

It’s also more convenient to ship and store. It doesn’t need ultra-cold storage, like the Pfizer and Moderna vaccines. Instead, it can be kept at standard refrigerator temperatures for three months. At colder temperatures, it is estimated to remain stable for a very long time: up to two years.

“This means that this is a vaccine that we can bring to people — rather than asking people to come to the vaccine,” said Dr. Nirav D. Shah, director of Maine’s Center for Disease Control and Prevention, at the CDC forum. “That will open up multiple new avenues of vaccination.”

Q: Wait — isn’t Johnson & Johnson a band aid company?

A: True. It was founded in the 1890s to sell disinfectants, bug-killing fumigants and a soap to wash dogs. During the 1910s, its national “Clean Up Week” campaign every March became a tradition we now call “spring cleaning.” In the 1920s, it invented the indispensable band aid, made from a simple strip of surgical tape and a pad of gauze.

But now it’s focused on harder problems. The company was one of the first to vaccinate its employees during our devastating smallpox outbreak. It mass-produced masks during the 1918-1919 Spanish flu pandemic. It created an Ebola vaccine. In January 2020, it launched a major research effort for a COVID-19 vaccine

Q: When will people get the new vaccine?

A: Due to manufacturing issues, there will only be about 4 million doses of its COVID-19 vaccine available until April. Of those, about 2 million will be shipped to states; the other 2 million will go to pharmacies and community health centers.

But more doses are coming. Globally, Johnson and Johnson has far larger dreams, aiming to produce1 billion doses by the end of 2021.

It has pledged to provide doses to lower income countries beginning this year through COVAX, the initiative led by the Global Alliance for Vaccines and Immunization, the World Health Organization, and others, Johnson & Johnson’s Dr. Richard Nettles told legislators at a subcommittee hearing of the House Committee on Energy and Commerce on Tuesday.

“Johnson & Johnson recognizes the global nature of the pandemic and the need for broad access to COVID-19 vaccines,” he said.

Q: Johnson & Johnson is an iconic American company. Is its vaccine manufactured here?

A: Actually, each dose has multiple passports.

The key first step of vaccine production is now taking place at facilities in three sites: Baltimore, the Netherlands and India. The production of the actual drug substance takes about two months, due to the time needed to grow the biological cells and then purify the active vaccine. The manufacturing of the final drug product takes about five to six weeks to produce, test, and release.

To accelerate production, the company will soon get help from French manufacturer Sanofi. It also plans to open eight other international sites. In a remarkable example of global interconnectivity, a single batch of the vaccine will likely visit multiple countries in its journey from a raw drug to a fi­nished vial for injection.

If approved after a review by the FDA’s Vaccines and Related Biological Products Advisory Committee, the new Johnson & Johnson vaccine could be authorized as soon as Saturday. (File photo) 

]]>
https://www.bostonherald.com/2021/02/26/how-the-new-one-dose-covid-19-vaccine-compares-to-pfizer-and-moderna/feed/ 0 2279035 2021-02-26T09:05:17+00:00 2021-02-26T15:24:08+00:00